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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jul 04, 2019 |
| Title |
The widely conserved microRNA, miR-1-3p, is a male-determining factor in the oriental fruit fly, Bactrocera dorsalis |
| Organism |
Bactrocera dorsalis |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
We constructed three small RNA libraries from embryos at 5, 6 and 7 post-oviposition (hpo) of Bactrocera dorsalis for deep sequencing. The data analysis revealed 147 known and 103 novel miRNAs from these libraries.
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| Overall design |
Small RNA profiles from embryos at 5, 6 and 7 post-oviposition (hpo) of Bactrocera dorsalis were generated by Illumina deep sequencing.
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| Contributor(s) |
Peng W, Zhang H |
| Citation(s) |
32071305 |
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| Submission date |
Jul 18, 2018 |
| Last update date |
Mar 02, 2020 |
| Contact name |
Wei Peng |
| E-mail(s) |
pengweijack@163.com
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| Organization name |
Huazhong Agricultural University
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| Street address |
Shizishan Street No. 1, Hongshan District, Wuhan,Hubei 430070, P.R. China
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| City |
Wuhan |
| ZIP/Postal code |
430070 |
| Country |
China |
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| Platforms (1) |
| GPL21756 |
Illumina HiSeq 2500 (Bactrocera dorsalis) |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA481743 |
| SRA |
SRP154338 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE117310_RAW.tar |
60.0 Kb |
(http)(custom) |
TAR (of XLS) |
| GSE117310_novel_miRNA.xls.gz |
18.2 Kb |
(ftp)(http) |
XLS |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
| Processed data are available on Series record |
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