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Series GSE117344 Query DataSets for GSE117344
Status Public on Jul 16, 2022
Title The nuclear general transcription factor TFIIFa interacts with the Topoisomerase VI complex and selectively controls the expression of genes encoding PPR proteins involved in organellar RNA editing.
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary The transcriptome analysis of the tfIIfα-1, and tfIIfα-2 comprises three biological replicates for mutant and WT genotypes.
 
Overall design tfIIfα-1, and tfIIfα-2, and wild type
 
Contributor(s) Dimnet L, Vriet C, Achard D, Lecampion C, Breuer C, Soubigou-Taconnat L, Sugimoto K, Delannoy E, Laloi C
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Submission date Jul 18, 2018
Last update date Jul 16, 2022
Contact name Christophe Laloi
E-mail(s) christophe.laloi@univ-amu.fr
Phone +334 91 82 95 64
Organization name Aix-Marseille Université
Department Biology
Lab LGBP
Street address 163 avenue de Luminy
City Marseille
State/province France
ZIP/Postal code 13009
Country France
 
Platforms (2)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (12)
GSM3291494 1171WTCol3-0-1
GSM3291495 1171WTCol3-0-2
GSM3291496 1171WTCol3-0-3
Relations
BioProject PRJNA481789
SRA SRP154389

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117344_Processed_data_Gene_expression_edgeR_complete.xlsx 15.1 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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