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Series GSE118017 Query DataSets for GSE118017
Status Public on Aug 02, 2018
Title Expression data from mouse bone marrow sinusoidal endothelial cells (SECs) before and after the ablation of classical dendrtic cells (cDCs)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The function of bone marrow sinusoidal endothelial cells may change upon the ablation of classical dendritic cells to promote vascular permeability and angiogenesis
Overall design Zbtb46dtr bone marrow were transplanted into irradiated wild-type recipients. After 8 weeks, these mice were treated with diphtheria toxin (DT) to ablate cDCs, or PBS as control. Sinusoidal endothelial cells were sorted from the bone marrow of these mice, and their RNA expression was analyzed using RNA-sequencing
Contributor(s) Zhang J, Link DC
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Submission date Aug 01, 2018
Last update date Feb 11, 2019
Contact name Daniel C Link
Phone 314-362-8771
Organization name Washington University in St Louis
Department Internal Medicine
Street address 660 South Euclid Avenue
City St. Louis
State/province MO
ZIP/Postal code 63110
Country USA
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (7)
GSM3317307 Bone marrow sinusoidal endothelial cells, PBS treated, biological rep 1
GSM3317308 Bone marrow sinusoidal endothelial cells, PBS treated, biological rep 2
GSM3317309 Bone marrow sinusoidal endothelial cells, PBS treated, biological rep 3
BioProject PRJNA484014
SRA SRP156050

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Supplementary file Size Download File type/resource
GSE118017_Normalized_count_data_FPKM.txt.gz 760.7 Kb (ftp)(http) TXT
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Processed data are available on Series record

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