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Series GSE119344 Query DataSets for GSE119344
Status Public on Jul 23, 2019
Title RNA-Seq on mpk8 and tcp14 mutants on dry and imbibited seeds - Dormancy release by phosphorylation
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary ngs2016_10_dormancy - RNA-Seq on mpk8 and tcp14 mutants on dry and imbibited seeds-Comparison of the expression of genes in wild seeds and in mpk8 and tcp14 mutants on dry seeds and at a precise imbibition time (24h, 25°C) and in the dark.-Dry harversted seed: WT, mpk8, tcp14, 24h of imbibition in dark at 25°C: WT, mpk8, tcp14.
 
Overall design 18 samples with 3 biological replicats. gene knock out
Web link http://tools.ips2.u-psud.fr/CATdb
 
Contributor(s) Puyaubert J, Soubigou-Taconnat L
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 31, 2018
Last update date Jul 25, 2019
Contact name Véronique BRUNAUD
E-mail(s) veronique.brunaud@inrae.fr
Organization name INRA - CNRS - UPSUD
Lab IPS2
Street address rue Noetzlin
City Gif-sur-Yvette
ZIP/Postal code 91190
Country France
 
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (18)
GSM3371563 WT_24h_1
GSM3371564 WT_24h_2
GSM3371565 WT_24h_3
Relations
BioProject PRJNA488814
SRA SRP159279

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119344_RAW.tar 4.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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