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Series GSE119788 Query DataSets for GSE119788
Status Public on Jun 03, 2020
Title γδ T Cells Promote Steatohepatitis by Orchestrating Innate and Adaptive Immune Programming
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Gene ontology analysis suggests that MCD diet induced changes in CD4+ T cells and γδ Tcells
 
Overall design Compare the transcriptome of γδ Tcells in WT Mice fed Ctl or MCD diet, and CD4+ T cells in WT and γδTCR-/- mice and fed Ctl or MCD diet
 
Contributor(s) Torres-Hernandez A, Miller G
Citation(s) 31529720
Submission date Sep 11, 2018
Last update date Sep 14, 2020
Contact name Varshini Vasudevaraja
E-mail(s) Varshini.Vasudevaraja@nyumc.org
Organization name NYU Langone Health
Department Pathology
Lab Applied Bioinformatics Laboratories
Street address 550 1st Avenue
City New York
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (12)
GSM3383840 A1: CD4+ T-cells from γδTCR-/- Mice fed Ctl diet
GSM3383841 A2: CD4+ T-cells from γδTCR-/- Mice fed Ctl diet
GSM3383842 B2: CD4+ T-cells from WT Mice fed Ctl diet
Relations
BioProject PRJNA490321
SRA SRP161478

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119788_counts.fpkm.csv.gz 582.4 Kb (ftp)(http) CSV
GSE119788_counts.raw.csv.gz 512.4 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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