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Series GSE120281 Query DataSets for GSE120281
Status Public on Apr 01, 2020
Title RNA-sequence data of hepatic stellate cells and liver sinusoidal endothelial cells from control and CCl4-treated mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We utilized RNA-sequencing strategy to explore the characterstics of gene expression profile of LSECs during CCl4-fibrosis, and to compare the activation feature between fibrotic-LSECs and fibrotic-HSCs which are the most acknowledged gatekeepers holding the key to liver fibrogenesis.
 
Overall design mRNA profiles of quiescent(Q) or fibrotic(F) hepatic stellate cells(HSC) and liver sinusoidal endothelial cells(SEC) in control or CCl4-treated mice were generated by RNA sequencing, in triplicate, using Illumina HiSeq 3000.
 
Contributor(s) Wang L, Ruan B, Duan J
Citation(s) 34277612
Submission date Sep 21, 2018
Last update date Jul 20, 2021
Contact name Bai Ruan
E-mail(s) bairuan@fmmu.edu.cn
Organization name Fourth Military Medical University
Street address No.169, Changle Road
City Xi'an
State/province Shannxi
ZIP/Postal code 710032
Country China
 
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (12)
GSM3397522 F-HSC
GSM3397523 F-HSC2
GSM3397524 F-HSC3
This SubSeries is part of SuperSeries:
GSE120283 RNA-sequence data of liver sinusoidal endothelial cells in quiescent versus fibrotic and wild-type versus endothelial RBPj-deficent mice
Relations
BioProject PRJNA492394
SRA SRP162307

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE120281_ruanbai-1.xls.gz 8.5 Mb (ftp)(http) XLS
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Raw data are available in SRA
Processed data are available on Series record

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