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Series GSE123373 Query DataSets for GSE123373
Status Public on Nov 26, 2019
Title Chromosome topology shapes neuronal non-CG DNA methylation to influence MeCP2-mediated enhancer repression
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 31784360, 33238114, 37952155
Submission date Dec 05, 2018
Last update date Feb 15, 2024
Contact name Harrison Wren Gabel
E-mail(s) gabelh@pcg.wustl.edu
Organization name Harvard Medical School
Department Neurbiology
Lab Michael Greenberg
Street address 220 longwood avenue
City brookline
State/province Massachusetts
ZIP/Postal code 02115
Country USA
 
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (116)
GSM3502265 WTKO_Input_WT1
GSM3502266 WTKO_Input_KO1
GSM3502267 WTKO_H3K27ac_WT1
This SuperSeries is composed of the following SubSeries:
GSE123371 Chromosome topology shapes neuronal non-CG DNA methylation to influence MeCP2-mediated enhancer repression (ChIP-Seq)
GSE123372 Chromosome topology shapes neuronal non-CG DNA methylation to influence MeCP2-mediated enhancer repression (RNA-Seq)
GSE138613 Chromosome topology shapes neuronal non-CG DNA methylation to influence MeCP2-mediated enhancer repression (Bisulfite-Seq)
Relations
BioProject PRJNA508525

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE123373_RAW.tar 329.4 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp

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