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Series GSE124313 Query DataSets for GSE124313
Status Public on May 15, 2019
Title Gene transcription and chromatin accessibility of conventional NK cells and ILC1s in spleens of uninfected and Toxoplasma gondii-infected Mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary RNA sequencing and ATAC-seq of conventional NK cells and ILC1s in uninfected mice and mice that were infected 5 wk previously with the Type II Prugniaud strain of T. gondii
 
Overall design RNA-seq and ATAC-seq analysis of conventional NK cells and ILC1s in T. gondii-infected mice
 
Contributor(s) Park E
Citation(s) 31393266
Submission date Dec 23, 2018
Last update date Aug 15, 2019
Contact name Eugene Park
E-mail(s) epark@wustl.edu
Phone 8478777638
Organization name Washington University
Street address 4616 Lindell Blvd, Apt 201
City Saint Louis
State/province MO
ZIP/Postal code 63108-3703
Country USA
 
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (22)
GSM3528830 RNA_cNK_uninfected_rep1
GSM3528831 RNA_cNK_uninfected_rep2
GSM3528832 RNA_cNK_uninfected_rep3
Relations
BioProject PRJNA511586
SRA SRP174369

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124313_RAW.tar 823.7 Mb (http)(custom) TAR (of BW, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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