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Series GSE126444 Query DataSets for GSE126444
Status Public on Dec 02, 2020
Title Evolution of heterochromatin and heterochromatin genes in the Oryza genomes reveals a new heterochromatin-euchromatin boundary
Organisms Oryza sativa; Oryza brachyantha; Oryza punctata; Oryza glaberrima; Sorghum bicolor; Oryza sativa Japonica Group; Leersia perrieri
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
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Submission date Feb 12, 2019
Last update date Dec 15, 2023
Contact name Lei Li
E-mail(s) lil@ioz.ac.cn
Organization name INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES
Street address 1 Beichen West Road, Chaoyang District, Beijing 100101, P.R.China
City Beijing
State/province Beijing
ZIP/Postal code 100101
Country China
 
Platforms (8)
GPL13160 Illumina HiSeq 2000 (Oryza sativa)
GPL13834 Illumina HiSeq 2000 (Oryza sativa Japonica Group)
GPL17362 Illumina HiSeq 2000 (Oryza glaberrima)
Samples (47)
GSM3601773 O_sativa_60d_RNASEQ
GSM3601774 O_glaberrima_60d_RNASEQ
GSM3601775 O_punctata_60d_RNASEQ
This SuperSeries is composed of the following SubSeries:
GSE126431 Evolution of heterochromatin and heterochromatin genes in the Oryza genomes reveals a new heterochromatin-euchromatin boundary [RNA-Seq]
GSE126432 Evolution of heterochromatin and heterochromatin genes in the Oryza genomes reveals a new heterochromatin-euchromatin boundary [bisulfite-Seq]
GSE126436 Evolution of heterochromatin and heterochromatin genes in the Oryza genomes reveals a new heterochromatin-euchromatin boundary [ChIP-Seq]
Relations
BioProject PRJNA521948

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126444_RAW.tar 217.3 Mb (http)(custom) TAR (of BED, BEDGRAPH, FPKM_TRACKING)
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