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Series GSE126472 Query DataSets for GSE126472
Status Public on Feb 13, 2019
Title The histone chaperone CAF-1 cooperates with the DNA methyltransferases to maintain Cd4 silencing in cytotoxic T cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 30975723
Submission date Feb 12, 2019
Last update date May 15, 2019
Contact name Dan Littman
E-mail(s) Dan.Littman@nyumc.org
Phone 212-263-7520
Organization name NYU School of Medicine
Street address 430 E 29th St Acls-West Tower 4th Fl Room 460E
City new york
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (3)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (30)
GSM3602251 shRenilla.713_CD8rep1_ATACseq
GSM3602252 shRenilla.713_CD8rep2_ATACseq
GSM3602253 shDnmt1.1137_CD8_ATACseq
This SuperSeries is composed of the following SubSeries:
GSE126470 The histone chaperone CAF-1 cooperates with the DNA methyltransferases to maintain Cd4 silencing in cytotoxic T cells (ATACseq I)
GSE126471 The histone chaperone CAF-1 cooperates with the DNA methyltransferases to maintain Cd4 silencing in cytotoxic T cells (ATACseq II)
GSE126613 The histone chaperone CAF-1 cooperates with the DNA methyltransferases to maintain Cd4 silencing in cytotoxic T cells (RNA-seq)
Relations
BioProject PRJNA521989

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126472_RAW.tar 2.8 Gb (http)(custom) TAR (of BIGWIG, BW)
SRA Run SelectorHelp

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