|
| Status |
Public on Apr 27, 2020 |
| Title |
Identification of herpes simplex virus 1 and host targets of miR-138 by combined RNAseq/PARCLIP |
| Organisms |
Homo sapiens; Mus musculus; Human alphaherpesvirus 1 |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
33558653, 38443365 |
| |
| Submission date |
Feb 28, 2019 |
| Last update date |
Mar 13, 2024 |
| Contact name |
Dongli Pan |
| E-mail(s) |
pandongli@zju.edu.cn
|
| Organization name |
Zhejiang University
|
| Street address |
866 Yuhangtang Road
|
| City |
Hangzhou |
| State/province |
Zhejiang |
| ZIP/Postal code |
110058 |
| Country |
China |
| |
|
| Platforms (5)
|
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
| GPL26236 |
Illumina NextSeq 500 (Homo sapiens; Human alphaherpesvirus 1) |
| GPL26237 |
Illumina NextSeq 500 (Human alphaherpesvirus 1; Mus musculus) |
| GPL28172 |
BGISEQ-500 (Human alphaherpesvirus 1; Mus musculus) |
|
| Samples (36)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE127501 |
Effects of host miR-138 on herpes simplex virus 1 gene expression in Neuro-2a cells and their dependence of the binding sites on ICP0 mRNA |
| GSE127502 |
Identification of targets of miR-138 in Neuro-2a and 293T cells by RNAseq |
| GSE127503 |
Identification of herpes simplex virus 1 and host targets of miR-138 by comparative PAR-CLIP in Neuro-2a and 293T cells |
| GSE145499 |
Identification of genes regulated by Foxc1, which is a host target of miR-138 |
|
| Relations |
| BioProject |
PRJNA524880 |
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