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Series GSE127806 Query DataSets for GSE127806
Status Public on Oct 18, 2019
Title Muscle transcriptional profiles of chickens from slow and fast growing lines with different degree of WS and WB myopathies
Organism Gallus gallus
Experiment type Expression profiling by array
Summary Broiler industry is facing an increasing prevalence of breast myopathies such as white striping (WS) and wooden breast (WB), whose precise etiology remains poorly understood. In order to progress in the understanding of the structural changes and the molecular pathways involved in these myopathies, and identify biomarkers, a transcriptomic analysis using an 8×60K Agilent chicken microarray was performed. The study used pectoralis major muscles from three groups: slow-growing animals (n=8), fast-growing animals visually free from defects (n=8) or severely affected by both WS and WB (n=8). In addition, a weighted correlation network analysis was performed to investigate the relationship between modules of co-expressed genes and histological traits.
 
Overall design Gene expression was measured in pectoralis major muscles from three groups: slow-growing animals, visually free from defects (SG, n=8) and fast-growing animals visually free from defects (FG-C, n=8) or severely affected by both WS and WB defects (FG-WSWB, n=8), at 42 days of age.
Web link https://www.nature.com/articles/s41598-019-51521-1
 
Contributor(s) Pampouille E, Hennequet-Antier C, Praud C, Juanchich A, Brionne A, Godet E, Bordeau T, Banville M, LeBihan-Duval E, Berri C
Citation(s) 31624339
Submission date Mar 04, 2019
Last update date Oct 21, 2019
Contact name Eva Pampouille
E-mail(s) eva.pampouille@inra.fr
Organization name INRA
Street address UMR BOA
City Nouzilly
ZIP/Postal code 37380
Country France
 
Platforms (1)
GPL20588 Agilent-037360 gallus_exp_microarray_SLagarrigue_8x60k_V1
Samples (24)
GSM3639189 Muscle_FG-C_01
GSM3639190 Muscle_FG-WSWB_01
GSM3639191 Muscle_FG-C_02
Relations
BioProject PRJNA525431

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE127806_RAW.tar 272.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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