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| Status |
Public on Jun 19, 2019 |
| Title |
The polyadenylation factor FIP1 is important for plant development and root responses to abiotic stresses |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We have analyzed the poly(A) usage between Arabidopsis control and fip1-2 mutant seedlings grown in normal medium. FIP1 is a subunit of the polyadenalation machinary and loss of function of FIP1 affects plant development and response to salt, ABA and cadmium.
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| Overall design |
Random sequencing of Poly(A) tag (PAT-seq) from Arabidopsis thaliana wild type and fip1-2 plants. Demultiplex trimmed reads.
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| Contributor(s) |
del Pozo JC |
| Citation(s) |
31111599 |
| |
| Submission date |
Mar 06, 2019 |
| Last update date |
Jun 20, 2019 |
| Contact name |
Juan Carlos del Pozo |
| E-mail(s) |
pozo@inia.es
|
| Organization name |
Centro de Biotecnología y Genómica de Plantas
|
| Department |
Biotechnology
|
| Lab |
180
|
| Street address |
Campus de Montegancedo, UPM
|
| City |
Pozuelo de Alracon |
| State/province |
Madrid |
| ZIP/Postal code |
28223 |
| Country |
Spain |
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| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA525889 |
| SRA |
SRP187778 |
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