|
Status |
Public on Aug 20, 2020 |
Title |
Neonatal hematopoietic stem and progenitor cell ontogeny at single cell resolution (ChIP-seq) |
Organism |
Mus musculus |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
Summary |
ChIPmentation-seq analysis of HSCs and HPCs during fetal, neonatal and adult stages of development
|
|
|
Overall design |
HSCs and HPCs were isolated at the stated ages for ChIP-seq The strain background for all experiments is B6
|
|
|
Contributor(s) |
Magee J |
Citation(s) |
32822583 |
|
Submission date |
Mar 24, 2019 |
Last update date |
Nov 23, 2020 |
Contact name |
Jeffery Magee |
E-mail(s) |
magee_j@kids.wustl.edu
|
Organization name |
Washington University School of Medicine
|
Department |
Internal Medicine - Cardiovascular Division
|
Street address |
660 S Euclid Ave.
|
City |
St Louis |
State/province |
Missouri |
ZIP/Postal code |
63110 |
Country |
USA |
|
|
Platforms (1) |
GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
Samples (27)
|
|
This SubSeries is part of SuperSeries: |
GSE128762 |
Neonatal hematopoietic stem and progenitor cell ontogeny at single cell resolution |
|
Relations |
BioProject |
PRJNA528805 |
SRA |
SRP189267 |
Supplementary file |
Size |
Download |
File type/resource |
GSE128760_Adult_HPC_H3K27ac.filt.narrowPeak.gz |
1.3 Mb |
(ftp)(http) |
NARROWPEAK |
GSE128760_Adult_HPC_H3K27ac.pooled.fc.signal.bigwig |
1.7 Gb |
(ftp)(http) |
BIGWIG |
GSE128760_Adult_HPC_H3K4me1.filt.narrowPeak.gz |
2.5 Mb |
(ftp)(http) |
NARROWPEAK |
GSE128760_Adult_HPC_H3K4me1.pooled.fc.signal.bigwig |
2.0 Gb |
(ftp)(http) |
BIGWIG |
GSE128760_Adult_HSC_H3K4me1.filt.narrowPeak.gz |
2.7 Mb |
(ftp)(http) |
NARROWPEAK |
GSE128760_Adult_HSC_H3K4me1.pooled.fc.signal.bigwig |
2.3 Gb |
(ftp)(http) |
BIGWIG |
GSE128760_Fetal_HPC_H3K27ac.filt.narrowPeak.gz |
960.4 Kb |
(ftp)(http) |
NARROWPEAK |
GSE128760_Fetal_HPC_H3K27ac.pooled.fc.signal.bigwig |
1.6 Gb |
(ftp)(http) |
BIGWIG |
GSE128760_Fetal_HPC_H3K4me1.filt.narrowPeak.gz |
3.4 Mb |
(ftp)(http) |
NARROWPEAK |
GSE128760_Fetal_HPC_H3K4me1.pooled.fc.signal.bigwig |
2.2 Gb |
(ftp)(http) |
BIGWIG |
GSE128760_Fetal_HSC_H3K4me1.filt.narrowPeak.gz |
4.1 Mb |
(ftp)(http) |
NARROWPEAK |
GSE128760_Fetal_HSC_H3K4me1.pooled.fc.signal.bigwig |
2.2 Gb |
(ftp)(http) |
BIGWIG |
GSE128760_adult_HPC_k27_2893.fc.signal.bigwig |
1.4 Gb |
(ftp)(http) |
BIGWIG |
GSE128760_adult_HPC_k27_2893.filt.narrowPeak.gz |
923.6 Kb |
(ftp)(http) |
NARROWPEAK |
GSE128760_fetal_HPC_k27_2893.fc.signal.bigwig |
1.4 Gb |
(ftp)(http) |
BIGWIG |
GSE128760_fetal_HPC_k27_2893.filt.narrowPeak.gz |
971.1 Kb |
(ftp)(http) |
NARROWPEAK |
SRA Run Selector |
Raw data are available in SRA |
Processed data are available on Series record |