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Series GSE133270 Query DataSets for GSE133270
Status Public on Dec 31, 2021
Title RNA expression profiles of mouse vascular smooth muscle cells (VSMCs) transfected with scramble siRNA (scr) and circEsyt2 siRNA (si-circ)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Circular RNAs play an important role in multiple pathological conditions. Recently, we identified a novel circRNA-circEsyt2 from mouse atherosclerosis (AS) model and found its involvement in AS development. To explore the molecular mechanism of circEsyt2, we performed RNA-seq to investigate the regulation of circEsyt2 on mRNA profiles.
Overall design RNA sequencing of VSMC transfected with scramble siRNA (scr) and circEsyt2 siRNA (si-circ) was performed on the HiSeq platform in the 150 bp pair-end model.
Contributor(s) Gong X, Zeng C
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Submission date Jun 25, 2019
Last update date Jan 02, 2022
Contact name Xue Gong
Organization name Army Medical University
Street address Changjiang branch Road
City Chongqing
ZIP/Postal code 400042
Country China
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (4)
GSM4760982 VSMCs, scr-1
GSM4760983 VSMCs, scr-2
GSM4760984 VSMCs, si-circ-1
BioProject PRJNA550967
SRA SRP212059

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE133270_RAW.tar 1.3 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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