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Series GSE134312

Query DataSets for GSE134312

Status

Public on Jul 16, 2019

Title

Pooled macrophage datasets from GEO

Sample organism

Homo sapiens

Experiment type

Third-party reanalysis
Expression profiling by high throughput sequencing

Summary

This is a collection of diverse publicly available macrophage datasets. The datasets belong to three different platforms and all normalized together using modified CDF files.

Overall design

197 published macrophage samples from seven series assayed on the GPL570, GPL571 and GPL96 platforms were re-analyzed. RMA was used to normalize the CEL files using modified CDF files to analyze the shared probes among the three different platforms.

Contributor(s)

Sahoo D

Citation(s)

32322218, 32444859

Submission date

Jul 15, 2019

Last update date

May 28, 2020

Contact name

Debashis Sahoo

E-mail(s)

dsahoo@ucsd.edu

Phone

6508624736

Organization name

UCSD

Department

Pediatrics

Lab

Boolean

Street address

9500 Gillman Drive

City

La Jolla

State/province

California

ZIP/Postal code

92093

Country

USA

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Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE134312_README.txt	4.7 Kb	(ftp)(http)	TXT
GSE134312_macrophage-bv.txt.gz	1.4 Mb	(ftp)(http)	TXT
GSE134312_macrophage-expr.txt.gz	17.7 Mb	(ftp)(http)	TXT
GSE134312_macrophage-idx.txt.gz	485.7 Kb	(ftp)(http)	TXT
GSE134312_macrophage-ih.txt.gz	1.7 Kb	(ftp)(http)	TXT
GSE134312_macrophage-info.txt.gz	591.4 Kb	(ftp)(http)	TXT
GSE134312_macrophage-survival.txt.gz	2.3 Kb	(ftp)(http)	TXT
GSE134312_macrophage-thr.txt.gz	583.9 Kb	(ftp)(http)	TXT
GSE134312_macrophage-vinfo.txt.gz	4.0 Mb	(ftp)(http)	TXT
Processed data are available on Series record