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Series GSE136143 Query DataSets for GSE136143
Status Public on Apr 15, 2023
Title Regulatory architecture of housekeeping genes is driven by promoter assemblies [Pol2]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Pol2 ChIA-PET in control and Ronin KO ES cells.
 
Overall design ChIA-PET (Chromosome interaction analysis by paired-end tags) targeting Pol2-associated interactions in control and Ronin-KO mouse embryonic stem cells.
 
Contributor(s) Dejosez Zwaka M, Weintraub AS, Hnisz D, Young RA, Zwaka TP
Citation(s) 37182209
Submission date Aug 21, 2019
Last update date Sep 12, 2023
Contact name Marion Dejosez Zwaka
E-mail(s) marion.dejosez@mssm.edu
Organization name Icahn School of Medicine at Mount Sinai
Department Black Family Stem Cell Institute
Lab Zwaka Lab
Street address 1425 Madison Ave
City New York
State/province NY
ZIP/Postal code 10029
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (2)
GSM4041604 Pol2 Chia-Pet Control
GSM4041605 Pol2 Chia-Pet Ronin KO
This SubSeries is part of SuperSeries:
GSE136145 Regulatory architecture of housekeeping genes is driven by promoter assemblies
Relations
BioProject PRJNA561371
SRA SRP219020

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE136143_RAW.tar 292.2 Mb (http)(custom) TAR (of CSV, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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