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Series GSE137820 Query DataSets for GSE137820
Status Public on Sep 02, 2020
Title Pioglitazone induces extensive PPARg-dependent hepatic expression of nuclear-mitochondrial genes
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report the results of RXR ChIP-Seq on 2 month old wildtype and liver specific PPARg knockout mice, fed control-diet or high fat-diet supplemented with Pio or vehicle for 12 weeks
Overall design Examination of the effect of Pioglitazone and high fat diet on liver RXR-DNA binding patterns
Contributor(s) Rudnick DA, Cliften PF
Citation(s) 32963510
Submission date Sep 22, 2019
Last update date Dec 02, 2020
Contact name Paul Cliften
Organization name Washington University
Department Genetics
Street address 4320 Forest Park Parkway
City St. Louis
ZIP/Postal code 63108
Country USA
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (80)
GSM4088950 Control_Diet_RXR_WT_1
GSM4088951 Control_Diet_RXR_WT_2
GSM4088952 Control_Diet_RXR_WT_3
BioProject PRJNA573530
SRA SRP222898

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE137820_RAW.tar 22.1 Mb (http)(custom) TAR (of NARROWPEAK, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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