GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE139848 Query DataSets for GSE139848
Status Public on Nov 01, 2022
Title Analysis of UTI on WT and muMT KO mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Either WT or muMT KO mice were infected with UPEC trans urethrealy twice 1 hour apart and culled 6 hours later. Kidneys were subsequently perfused, RNA extracted and analysed via RNASeq
Overall design 4 WT mice and 4 muMT KO mice
Contributor(s) Ferdinand JR, Suchanek O, Clatworthy MR
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Nov 01, 2019
Last update date Nov 01, 2022
Contact name John Robert Ferdinand
Organization name University of Cambridge
Street address Department of Medicine
City Cambridge
ZIP/Postal code CB2 0QH
Country United Kingdom
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (8)
GSM4147330 1_WT
GSM4147331 2_WT
GSM4147332 5_WT
BioProject PRJNA587148
SRA SRP227984

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE139848_Count_Table.csv.gz 339.5 Kb (ftp)(http) CSV
GSE139848_Normalized_Counts.csv.gz 760.0 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap