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Series GSE144560 Query DataSets for GSE144560
Status Public on Mar 30, 2020
Title Search for mitochondrial editing defect in an Arabidopsis PPR mutant
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary ngs2019_18_eplus-eplus-search for mitochondrial editing defect in an arabidopsis PPR mutant Annotation, RNA/Small-RNA quantification: editing quantification. The Mito samples were first enriched with mitochondria by a series of multi-speed centrifugations after grinding with mortar at 4°C.
 
Overall design 12 samples with 3 biological replicates. gene knock out
Web link http://tools.ips2.u-psud.fr/CATdb
 
Contributor(s) Alaunay A, Delannoy E, Taconnat-Soubigou L
Citation(s) 32098170
Submission date Jan 30, 2020
Last update date Mar 30, 2020
Contact name Véronique BRUNAUD
E-mail(s) veronique.brunaud@inrae.fr
Organization name INRA - CNRS - UPSUD
Lab IPS2
Street address rue Noetzlin
City Gif-sur-Yvette
ZIP/Postal code 91190
Country France
 
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (12)
GSM4290863 Mito_col_1
GSM4290864 Mito_col_2
GSM4290865 Mito_col_3
Relations
BioProject PRJNA604023
SRA SRP246179

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144560_RAW.tar 19.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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