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Series GSE144720 Query DataSets for GSE144720
Status Public on Feb 04, 2020
Title Atlas of Brown Adipose Tissue
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Heterogeneity in brown adipocyte populations was observed.
Until recently, thermogenic adipocytes have been considered a homogeneous population. However, studies have pointed to the existence of multiple subtypes, which are distinct in developmental origin, substrate usage and transcriptome. Our current incomplete understanding of cell types in brown and beige adipose tissue and the lack of specific markers constitute a critical barrier to studying their biological functions. Our goal is to use the advances in single-cell genomics to determine subtypes that constitute adipose tissue under various thermogenic stimuli at the single cell resolution.
Overall design Identifying populations of brown adipocytes
Contributor(s) Shinoda K, Benitez G
Citation(s) 32597862
Submission date Feb 03, 2020
Last update date May 14, 2021
Contact name Kosaku Shinoda
Organization name Albert Einstein College of Medicine
Department Endocrinology
Lab Shinoda Lab
Street address 1301 Morris Park Avenue
City Bronx
State/province New York
ZIP/Postal code 10461
Country USA
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (1)
GSM4294308 iBAT
BioProject PRJNA604636
SRA SRP247009

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144720_RAW.tar 9.4 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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