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Series GSE145372 Query DataSets for GSE145372
Status Public on Oct 13, 2020
Title Whole transcriptome sequencing in human cervical adenocarcinoma and normal cervical tissues
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary mRNA, lncRNA, and miRNA signatures were identified to discriminate cervical adenocarcinoma from normal cervix by whole transcriptome sequencing. We confirmed the RNA-seq data in another cohort of clinical cervical tissue samples by qRT-PCR.We demonstrated that miR-192-5p/HNF1A-AS1/VIL1 panel could accurately discriminates adenocarcinoma from normal cervix. Moreover,we also identified the circRNA expression profiles in cervical adenocarcinoma tissues and explored the function roles and mechanisms of circular RNA circEYA1 and circSPIDR in cervical adenocarcinoma cells.
 
Overall design Examination of mRNA, lncRNA, miRNA, and circRNA signatures in 4 cervical adenocarcinoma tissues and 4 normal cervical tissues
 
Contributor(s) Xu J, Lu W
Citation(s) 33024199, 33312754
Submission date Feb 17, 2020
Last update date Jan 04, 2021
Contact name Junfen Xu
E-mail(s) xjfzu@zju.edu.cn
Phone 8613567147767
Organization name Women’s Hospital, Zhejiang University School of Medicine
Department Department of Gynecologic Oncology
Street address No.1 Xueshi Road
City Hangzhou
State/province Other (Non U.S.)
ZIP/Postal code 310006
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (16)
GSM4317445 Norm1
GSM4317446 Norm2
GSM4317447 Norm3
Relations
BioProject PRJNA607023
SRA SRP249688

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE145372_All.Counts.miRNA.txt.gz 62.3 Kb (ftp)(http) TXT
GSE145372_All.counts.RNA.txt.gz 542.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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