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Series GSE149020 Query DataSets for GSE149020
Status Public on Apr 19, 2022
Title Next generation sequencing quantitatively analyzes transcriptomes of primary CLL cells tranfected with non-specific control (NSC) or ZAP-70 siRNA (-anti-IgM dataset)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA seq profiles of primary CLL cells transfected with non-specific control (NSC) or ZAP-70 siRNA ± anti-IgM. This submission is -anti-IgM.
 
Overall design mRNA profiles of primary CLL cells tranfected with non-specific control (NSC) or ZAP-70 siRNA (± anti-IgM) were generated by deep sequencing, in two patients, each in triplicate.
 
Contributor(s) Chen J, Sathiaseelan V, Shahsavari A, Mohorianu I, Ringshausen I
Citation(s) 33619528
Submission date Apr 21, 2020
Last update date Apr 20, 2022
Contact name Irina Mohorianu
E-mail(s) data-submissions@stemcells.cam.ac.uk
Organization name University of Cambridge
Department Wellcome-MRC Cambridge Stem Cell Institute
Street address Puddicombe Way
City Cambridge
ZIP/Postal code CB2 0AW
Country United Kingdom
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (11)
GSM4487553 Sample 1: P1.C.M.1
GSM4487554 Sample 2: P1.C.M.2
GSM4487555 Sample 3: P1.C.M.3
This SubSeries is part of SuperSeries:
GSE149022 Next generation sequencing quantitatively analyzes transcriptomes of primary CLL cells tranfected with non-specific control (NSC) or ZAP-70 siRNA
Relations
BioProject PRJNA627168
SRA SRP257713

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149020_normalized.csv.gz 877.1 Kb (ftp)(http) CSV
GSE149020_raw.csv.gz 530.1 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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