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Series GSE149766 Query DataSets for GSE149766
Status Public on Apr 12, 2021
Title Negative Elongation Factor (NELF) regulation of muscle progenitor expansion assessed via Precision Run-On Sequencing (PRO-seq)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Assessment of promoter-proximal RNA polymerase II pausing in wild type and NELF-B KO (muscle stem cell-specific deletion) myoblasts
Overall design PRO-seq: 2 biological replicates each for WT and NELF-B KO; RNA-seq: 2 biological replicates each for WT and NELF-B KO
Contributor(s) Robinson DC, Goldman SR, Nelson GM, Adelman K, Dilworth FJ
Citation(s) 33735618
Submission date May 03, 2020
Last update date Apr 14, 2021
Contact name Karen Adelman
Organization name Harvard Medical School
Department Biological Chemistry and Molecular Pharmacology
Street address 45 Shattuck St. LHRRB-201a
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (8)
GSM4512063 PRO_WT_1
GSM4512064 PRO_WT_2
BioProject PRJNA630071
SRA SRP259970

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149766_RAW.tar 377.4 Mb (http)(custom) TAR (of BW)
GSE149766_deseq2results_nelfbko_vs_wt.tsv.gz 1.3 Mb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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