NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE149985 Query DataSets for GSE149985
Status Public on Mar 30, 2022
Title Single-cell Gene expression of WT and LRF-deficient thymic IEL precusors (IELp)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To examine how the cluster composition of IELp and their transcriptomic signatures were affected by LRF disruption, single-cell gene expression of IELp from control (Cd4 Cre–Lrffl/fl) and LRF KO(Cd4 Cre+Lrffl/fl )mice were determined by scRNAseq
 
Overall design IELp from control (Cd4 Cre–Lrffl/fl) and LRF KO(Cd4 Cre+Lrffl/fl )mice were sorted and gene expression was determined by scRNAseq
 
Contributor(s) Bosselut R, Nie J
Citation(s) 35354951
Submission date May 06, 2020
Last update date Jun 29, 2022
Contact name Jia Nie
E-mail(s) jia.nie@nih.gov
Organization name National Cancer Institute
Department Center for Cancer Research
Lab Laboratory of Immune cell Biology
Street address Building 37, Room 3016
City Bethesda
State/province Maryland
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM4519270 IELp Ctrl
GSM4519271 IELp LRF KO
GSM5639296 IELp Ctrl_rep_2
Relations
BioProject PRJNA630733
SRA SRP260292

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149985_RAW.tar 138.3 Mb (http)(custom) TAR (of H5, MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap