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Series GSE150444 Query DataSets for GSE150444
Status Public on Sep 02, 2020
Title RNA associating with PIWI proteins in Bombyx mori BmN4 cells
Organism Bombyx mori
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary RNAs associating with PIWI proteins were Immunoisolated from BmN4 cells. Sequence libraries were generated with NEBNext Small RNA Library Prep Set for Illumina(NEB). Libraries were sequenced using Illumina MiSeq (single-end, 51 cycles).
 
Overall design Small RNA sequences of RNAs associating with PIWI proteins expressed in BmN4 cell were performed with miSeq
 
Contributor(s) Nishida KM, Sakakibara K, Siomi MC
Citation(s) 32914505
Submission date May 12, 2020
Last update date Dec 02, 2020
Contact name Mikiko C Siomi
Organization name The University of Tokyo
Street address Faculty of Science Bldg.3, Rm126, 2-11-16 Yayoi, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-0032
Country Japan
 
Platforms (1)
GPL18754 Illumina MiSeq (Bombyx mori)
Samples (9)
GSM4550652 Ago3-piRNA
GSM4550653 Target-L
GSM4550654 Target-S
Relations
BioProject PRJNA632342
SRA SRP261356

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE150444_TE-kawaoka-line.fa.gz 125.8 Kb (ftp)(http) FA
GSE150444_Target-L-S_abundance.xlsx 16.5 Kb (ftp)(http) XLSX
GSE150444_siL12siA12siV12_rpm.txt.gz 9.8 Mb (ftp)(http) TXT
GSE150444_siLuc_piRNA_TE_mapped_rpm.txt.gz 451.7 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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