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Series GSE151005 Query DataSets for GSE151005
Status Public on May 22, 2020
Title Analysis of NPC48 overexpressing in Arabidopsis roots
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary We analyze the effect of the overexpression of the lncRNA NPC48 on the transcriptome. Root apices were harvested and total RNA extracted for RNA sequencing.
 
Overall design RNA-seq experiments (polyA+ RNA) in triplicates for each condition WT and 35S:NPC48 lines.
 
Contributor(s) Blein T, Christ A, Hartamnn C, Roulé T, Crespi M
Citation(s) 32404413
Submission date May 21, 2020
Last update date May 25, 2020
Contact name Thomas Blein
E-mail(s) thomas.blein@cnrs.fr
Organization name CNRS
Lab IPS2
Street address rue de Noetzlin
City Gif-sur-Yvette
ZIP/Postal code 91190
Country France
 
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (6)
GSM4563982 Col0_A
GSM4563983 Col0_B
GSM4563984 Col0_D
Relations
BioProject PRJNA634360
SRA SRP262665

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE151005_RAW.tar 710.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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