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Series GSE153116 Query DataSets for GSE153116
Status Public on Mar 09, 2021
Title CASB: A concanavalin A-based sample barcoding strategy for single-cell sequencing
Organisms Drosophila melanogaster; Homo sapiens; Canis lupus familiaris; Cricetulus griseus; Mus musculus; Rattus norvegicus; Chlorocebus sabaeus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 33821571
Submission date Jun 23, 2020
Last update date Apr 20, 2021
Contact name Guipeng Li
E-mail(s) guipeng.lee@gmail.com, ligp@sustech.edu.cn
Organization name Southern University of Science and Technology
Street address 1088 Xueyuan Avenue
City Shenzhen
ZIP/Postal code 518055
Country China
 
Platforms (3)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
GPL25526 Illumina NovaSeq 6000 (Homo sapiens; Mus musculus)
GPL29623 Illumina NovaSeq 6000 (Canis lupus familiaris; Chlorocebus sabaeus; Cricetulus griseus; Drosophila melanogaster; Homo sapiens; Mus musculus; Rattus norvegicus)
Samples (197)
GSM4634377 scRNA-seq of HAP1 cells
GSM4634453 scRNA-seq of MDA-MB-231, MCF7, T-47D, MDA-MB-452 and MEF cells
GSM4634460 snATAC-seq of HAP1 and MDA-MB-231 cells
This SuperSeries is composed of the following SubSeries:
GSE153108 CASB: A concanavalin A-based sample barcoding strategy for single-cell sequencing [HAP1]
GSE153113 CASB: A concanavalin A-based sample barcoding strategy for single-cell sequencing [mixed Sample of cell lines and organisms]
GSE153115 CASB: A concanavalin A-based sample barcoding strategy for single-cell sequencing [snATAC]
Relations
BioProject PRJNA641443

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE153116_RAW.tar 155.7 Mb (http)(custom) TAR (of H5)
SRA Run SelectorHelp

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