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Series GSE155154 Query DataSets for GSE155154
Status Public on Aug 11, 2021
Title Human AMD
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Retinal RNA profiles from macula and periphery of each eye were generated by deep sequencing on an Illumina Hi-Seq. 12 biological samples were analyzed.
 
Overall design Donor eyes were obtained from non-diabetic Caucasians at a death-to-preservation interval of <6h. Eyes were stored in RNA later before extraction of RNA. For each eye we dissected macula and periphery from retina and RPE/choroid/sclera resulting in 4 samples per eye.
 
Contributor(s) Stambolian D
Citation(s) 34341398, 35705048, 35784369
Submission date Jul 27, 2020
Last update date Jul 07, 2022
Contact name Dwight Edward Stambolian
E-mail(s) stamboli@pennmedicine.upenn.edu
Phone 2158980305
Organization name University of Pennsylvania
Department Opthalmalogy
Lab Stellar-Chance 313
Street address 422 Curie Blvd.
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (56)
GSM4696354 11-1732 Macula Retina
GSM4696355 11-1732 Peripheral Retina
GSM4696356 11-2033 Macula Retina
Relations
BioProject PRJNA648863
SRA SRP273695

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE155154_RAW.tar 972.3 Mb (http)(custom) TAR (of CXB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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