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Series GSE155309 Query DataSets for GSE155309
Status Public on Jun 09, 2023
Title Nuclear translocation of an aminoacyl-tRNA synthetase may mediate a chronic "integrated stress response"
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Various stress conditions are signaled through phosphorylation of translation initiation factor eukaryotic initiation factor 2α (eIF2α) to inhibit global translation while selectively activating transcription factor ATF4 to aid cell survival and recovery. However, this integrated stress response is acute and cannot resolve lasting stress. Here, we report that tyrosyl-tRNA synthetase (TyrRS), a member of the aminoacyl-tRNA synthetase family that responds to diverse stress conditions through cytosol-nucleus translocation to activate stress-response genes, also inhibits global translation. However, it occurs at a later stage than eIF2α/ATF4 and mammalian target of rapamycin (mTOR) responses. Excluding TyrRS from the nucleus over-activates translation and increases apoptosis in cells under prolonged oxidative stress. Nuclear TyrRS transcriptionally represses translation genes by recruiting TRIM28 and/or NuRD complex. We propose that TyrRS, possibly along with other family members, can sense a variety of stress signals through intrinsic properties of this enzyme and strategically located nuclear localization signal and integrate them by nucleus translocation to effect protective responses against chronic stress.
 
Overall design Tyrosyl-tRNA synthetase DNA binding sites (TF-ChIP)
Web link https://www.sciencedirect.com/science/article/pii/S2211124723006435?via%3Dihub
 
Contributor(s) Wei N, Yang X, Cui H
Citation(s) 37314928
Submission date Jul 28, 2020
Last update date Sep 08, 2023
Contact name Xiang-Lei Yang
E-mail(s) xlyang@scripps.edu
Phone 8587848976
Organization name Scripps Research
Department Molecular Medicine
Lab Yang
Street address 10550 North Torrey Pines Road BCC-110
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (6)
GSM4698816 IgG control
GSM4698817 IgG control input
GSM4698818 TyrRS rep1
Relations
BioProject PRJNA649280
SRA SRP274003

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE155309_TableS1_Wei_et_al.xlsx 17.7 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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