|
| Status |
Public on Dec 01, 2020 |
| Title |
DNA features beyond the transcription factor binding sites specify target recognition by plant bHLHs [DAP-seq] |
| Organisms |
Marchantia polymorpha; Arabidopsis thaliana; Solanum lycopersicum |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
DNA binding analysis of MYCs using Arabidopsis- and bHLH.specific Protein Binding Microarrays
|
| |
|
| Overall design |
DAP-seq experiments
|
| |
|
| Contributor(s) |
Franco-Zorrilla JM |
| Citation(s) |
34778747 |
| |
| Submission date |
Jul 28, 2020 |
| Last update date |
Nov 18, 2021 |
| Contact name |
Jose M. Franco-Zorrilla |
| Organization name |
Centro Nacinal de Biotecnologia-CSIC
|
| Department |
Plant Molecular Genetics
|
| Street address |
Darwin, 3
|
| City |
Madrid |
| State/province |
Madrid |
| ZIP/Postal code |
28049 |
| Country |
Spain |
| |
|
| Platforms (5)
|
| GPL17639 |
Illumina HiSeq 2500 (Arabidopsis thaliana) |
| GPL23157 |
HiSeq X Ten (Arabidopsis thaliana) |
| GPL26208 |
Illumina NovaSeq 6000 (Arabidopsis thaliana) |
| GPL27957 |
Illumina NovaSeq 6000 (Solanum lycopersicum) |
| GPL28942 |
Illumina HiSeq 2500 (Marchantia polymorpha) |
|
| Samples (27)
|
|
| This SubSeries is part of SuperSeries: |
| GSE155321 |
DNA features beyond the transcription factor binding sites specify target recognition by plant bHLHs |
|
| Relations |
| BioProject |
PRJNA649293 |
| SRA |
SRP274014 |
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