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| Status |
Public on Mar 31, 2010 |
| Title |
Gene expression profiling of distinct serotypes of Actinobacillus pleuropneumoniae |
| Organism |
Actinobacillus pleuropneumoniae |
| Experiment type |
Expression profiling by array
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| Summary |
To further confirm the genetic diversity and virulence evolution of A. pleuropneumoniae
To determine the gene sets with different expression levels (high, normal and low, respectively)
Keywords: serotype comparison
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| Overall design |
A. pleuropneumoniae strains were grown in TSB medium supplemented with 10 μg/ml nicotinamide adenine dinucleotide and 10% (v/v) filtered cattle serum at 37°C. The intensities were normalized and transformed into log2 value. The values for each time point were averaged and the genes with log2 ratio >=1 or <=-1 were selected as differentially expressed genes.
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| Contributor(s) |
Xu Z, Li L, Zhou R, Chen H |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Apr 03, 2009 |
| Last update date |
Sep 03, 2014 |
| Contact name |
Lu Li |
| E-mail(s) |
sakura.tree@163.com, xuzf@mail.hzau.edu.cn, xuzhuofei@sohu.com, kobe2071@tom.com
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| Organization name |
Huazhong Agricultural University
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| Street address |
Shizishan Street 1
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| City |
Wuhan |
| State/province |
Hubei |
| ZIP/Postal code |
430070 |
| Country |
China |
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| Platforms (1) |
| GPL8394 |
Agilent-022097 Actinobacillus pleuropneumoniae expression array |
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| Samples (15)
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| Relations |
| BioProject |
PRJNA115981 |
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