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Series GSE157229 Query DataSets for GSE157229
Status Public on Sep 01, 2020
Title In situ Hi-C profile of neutrophils from human peripheral blood
Organism Homo sapiens
Experiment type Other
Summary Neutrophils were enriched from the peripheral blood of one healthy male human donor. High-throughput chromosome confirmation capture (Hi-C) was used to examine DNA interactions between chromosomes.
Overall design The data consists of one Hi-C profile of neutrophil cells isolated from one healthy human male donor.
Contributor(s) Coughlan HD, Smyth GK, Johanson TM
Citation(s) 33665577
Submission date Aug 31, 2020
Last update date Mar 11, 2021
Contact name Gordon K Smyth
Phone (+61 3) 9345 2326
Fax (+61 3) 9347 0852
Organization name Walter and Eliza Hall Institute of Medical Research
Department Bioinformatics
Lab Smyth
Street address 1G Royal Pde
City Parkville
State/province Vic
ZIP/Postal code 3052
Country Australia
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (1)
GSM4759479 Neutrophils cells 1
BioProject PRJNA660473
SRA SRP279498

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE157229_GenomicRegions.bed.gz 575.5 Kb (ftp)(http) BED
GSE157229_RAW.tar 290.5 Mb (http)(custom) TAR (of MTX)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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