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Series GSE158879 Query DataSets for GSE158879
Status Public on Jun 09, 2023
Title Age associated epigenome changes in human mammary epithelial cells (ATAC-Seq)
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ATAC-seq profiling of luminal epithelial cells obtained from reduction mammoplasty tissue from young (<30 year) and old (>55 year) individuals.
 
Overall design We performed ATAC-seq on mammary luminal epithelial cells from young and old individuals.
 
Contributor(s) Senapati P, LaBarge MA, Schones DE
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Submission date Oct 01, 2020
Last update date Oct 17, 2023
Contact name Parijat Senapati
E-mail(s) pasenapati@coh.org
Organization name Beckman Research Institute, City of Hope
Street address 1500 E. Duarte Rd
City Duarte
ZIP/Postal code 91010
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (16)
GSM4813808 ATAC_240L_Y1_luminal-rep1
GSM4813809 ATAC_240L_Y1_luminal-rep2
GSM4813810 ATAC_172L_Y2_luminal-rep1
This SubSeries is part of SuperSeries:
GSE153696 Age associated epigenome changes in human mammary epithelial cells
Relations
BioProject PRJNA666886
SRA SRP286014

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158879_RAW.tar 92.9 Mb (http)(custom) TAR (of NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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