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Series GSE160015 Query DataSets for GSE160015
Status Public on Jun 06, 2021
Title STAG proteins mediate heterochromatin organization to support translation and cell identity [UMI-4C]
Organism Mus musculus
Experiment type Other
Summary Abstract to be added later
 
Overall design To determine the chromatin conformation contact profiles of specifc sites in the mouse genome we used UMI-4C. This allowed us to also calculate cell-type specific contact distributions.
 
Contributor(s) Hadjur S, Pezic D, Varsally W, Weeks SL
Citation(s) 37802073
Submission date Oct 25, 2020
Last update date Dec 14, 2023
Contact name Suzana Hadjur
E-mail(s) s.hadjur@ucl.ac.uk
Phone +44 7798957199
Organization name Ucl
Department Cancer biology
Lab Genome organization
Street address 72 Huntley street
City London
ZIP/Postal code Wc1e6bt
Country United Kingdom
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (14)
GSM4852512 Nanog bait 1_ESC_Rep1
GSM4852513 Nanog bait 1_ESC_Rep2
GSM4852514 Nanog bait 1_ESC_Rep3
This SubSeries is part of SuperSeries:
GSE160390 PEZIC_STAG1_Pluripotency
Relations
BioProject PRJNA671632
SRA SRP288460

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE160015_RAW.tar 3.9 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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