|
| Status |
Public on Nov 08, 2023 |
| Title |
The Enterotoxigenic Bacteroides fragilis (ETBF) in intestinal inflammation and colorectal carcinogenesis [exosomes] |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
To elucidate whether Enterotoxigenic Bacteroides fragilis (ETBF) plays a role in intestinal inflammation and colorectal carcinogenesis, a RNA-seq analysis was performed to compare the microRNA profiles of exosomes derived from ETBF-treated HCT116 colorectal cancer cell lines.
|
| |
|
| Overall design |
miRNA-seq was performed in exosomes derived from HCT116 colorectal cancer cells after ETBF treatment.
|
| |
|
| Contributor(s) |
Cao Y |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Nov 08, 2020 |
| Last update date |
Nov 08, 2023 |
| Contact name |
Haoyan Chen |
| Organization name |
Renji Hospital
|
| Street address |
145 Shandong Road
|
| City |
Shanghai |
| State/province |
Shanghai |
| ZIP/Postal code |
200001 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL21290 |
Illumina HiSeq 3000 (Homo sapiens) |
|
| Samples (6)
|
| GSM4888909 |
Exosomes derived from HCT116 Cell line untreated-replicate 1 |
| GSM4888910 |
Exosomes derived from HCT116 Cell line untreated-replicate 2 |
| GSM4888911 |
Exosomes derived from HCT116 Cell line untreated-replicate 3 |
| GSM4888912 |
Exosomes derived from HCT116 Cell line treated by ETBF for 6 hours-replicate 1 |
| GSM4888913 |
Exosomes derived from HCT116 Cell line treated by ETBF for 6 hours-replicate 2 |
| GSM4888914 |
Exosomes derived from HCT116 Cell line treated by ETBF for 6 hours-replicate 3 |
|
| This SubSeries is part of SuperSeries: |
| GSE161049 |
The Enterotoxigenic Bacteroides fragilis (ETBF) in intestinal inflammation and colorectal carcinogenesis |
|
| Relations |
| BioProject |
PRJNA675360 |
| SRA |
SRP291581 |
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