|
| Status |
Public on Feb 28, 2021 |
| Title |
RAD21-TEV NLS-TEV RNAseq - extended cohesin depletion |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq of vehicle and doxycycline treated Rad21-TEV primary neuron transduced with NLS-TEV, inducing extended cohesin depletion
|
| |
|
| Overall design |
Total of 6 samples analysed; 3 replicates of Rad21-tev primary neurons 7 days following doxycyline treatment (24 hours, 100ug/ml), 3 replicates of Rad21-tev primary neurons 7 days following vehicle treatment
|
| |
|
| Contributor(s) |
Merkenschlager M, Wang Y, Weiss F |
| Citation(s) |
34006846 |
| |
| Submission date |
Nov 19, 2020 |
| Last update date |
Jun 03, 2021 |
| Contact name |
LMS Bioinformatics Core |
| E-mail(s) |
bioinformatics@lms.mrc.ac.uk
|
| Organization name |
MRC London Institute of Medical Sciences
|
| Department |
Bioinformatics Core
|
| Street address |
Hammersmith Hospital Campus, Du Cane Road
|
| City |
London |
| ZIP/Postal code |
W12 0NN |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (6)
|
| GSM4914603 |
Rad21tev+1UGDOX24H_6DWASH_primary_neuron_culture Rep1 |
| GSM4914604 |
Rad21tev+1UGDOX24H_6DWASH_primary_neuron_culture Rep2 |
| GSM4914605 |
Rad21tev+1UGDOX24H_6DWASH_primary_neuron_culture Rep3 |
| GSM4914606 |
Rad21tev+VEH24H_6DWASH_primary_neuron_culture Rep1 |
| GSM4914607 |
Rad21tev+VEH24H_6DWASH_primary_neuron_culture Rep2 |
| GSM4914608 |
Rad21tev+VEH24H_6DWASH_primary_neuron_culture Rep3 |
|
| This SubSeries is part of SuperSeries: |
| GSE150130 |
Partial rescue of neuronal genes deregulated in CdLS by cohesin |
|
| Relations |
| BioProject |
PRJNA679484 |
| SRA |
SRP293244 |
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