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Series GSE16221 Query DataSets for GSE16221
Status Public on Feb 12, 2010
Title UTX Chromatin Immunoprecipitation on human HG18 Nimblegen 2 array promoter set
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary UTX binding sites were located genome wide in primary human fibroblasts (foot and lung)
Tiled promoters with a probe per 100bp of refseq known genes 3kb upstream and 700 bp downstream of transcriptional start
Overall design 8 samples (2 cell types (foot and lung primary human fibroblasts) x 2 set promoter arrays x 2 channels (channel 1 = ChIP = Cy5, channel 2 = input (10% of total genomic DNA hybed) = Cy3)
Contributor(s) Wang J
Citation(s) 20123895
Submission date May 26, 2009
Last update date Mar 21, 2012
Contact name Jordon K Wang
Phone 650-724-9140
Fax 650-723-8762
Organization name Stanford University
Department Dermatology
Lab CCSR 4124
Street address 269 Campus Dr.
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
Platforms (1)
GPL6325 NimbleGen Homo sapiens HG18 promoter 1 of 2
Samples (8)
GSM407349 UTX chip_Lung_1of2
GSM407350 UTX input_Lung_1of2
GSM407351 UTX input_Lung_2of2
BioProject PRJNA117163

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE16221_RAW.tar 26.8 Mb (http)(custom) TAR
Processed data not provided for this record

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