|
| Status |
Public on Feb 12, 2010 |
| Title |
UTX Chromatin Immunoprecipitation on human HG18 Nimblegen 2 array promoter set |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by genome tiling array
|
| Summary |
UTX binding sites were located genome wide in primary human fibroblasts (foot and lung)
Tiled promoters with a probe per 100bp of refseq known genes 3kb upstream and 700 bp downstream of transcriptional start
|
| |
|
| Overall design |
8 samples (2 cell types (foot and lung primary human fibroblasts) x 2 set promoter arrays x 2 channels (channel 1 = ChIP = Cy5, channel 2 = input (10% of total genomic DNA hybed) = Cy3)
|
| |
|
| Contributor(s) |
Wang J |
| Citation(s) |
20123895 |
| |
| Submission date |
May 26, 2009 |
| Last update date |
Mar 21, 2012 |
| Contact name |
Jordon K Wang |
| E-mail(s) |
jordon@stanford.edu
|
| Phone |
650-724-9140
|
| Fax |
650-723-8762
|
| Organization name |
Stanford University
|
| Department |
Dermatology
|
| Lab |
CCSR 4124
|
| Street address |
269 Campus Dr.
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL6325 |
NimbleGen Homo sapiens HG18 promoter 1 of 2 |
|
| Samples (8)
|
|
| Relations |
| BioProject |
PRJNA117163 |
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