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Series GSE162343 Query DataSets for GSE162343
Status Public on Sep 22, 2022
Title RNA-sequencing in medial prefrontal cortex of early socially isolated mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To explore the molecular mechanism underlying social isolation and resocialization, we performed RNA-seq on mPFC samples from the ~7-week-old control and social isolation mice. We identified 1265 differentially expressed genes (DEGs) that were enriched in 4 pathways: cognitive behavior, myelin development, synaptic development, and ion channels.
Overall design 7-week-old Control and Social isolation mice
Citation(s) 36059036
Submission date Nov 30, 2020
Last update date Sep 23, 2022
Contact name ** **
Organization name ***
Street address ***
City ***
ZIP/Postal code ***
Country China
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (6)
GSM4950061 mPFC-Control-rep1
GSM4950062 mPFC-Control-rep2
GSM4950063 mPFC-Control-rep3
BioProject PRJNA681564
SRA SRP295122

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162343_AllSamples.GeneExpression.FPKM.txt.gz 2.0 Mb (ftp)(http) TXT
GSE162343_RAW.tar 10.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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