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Series GSE163466 Query DataSets for GSE163466
Status Public on Feb 24, 2021
Title Convergent organization of aberrant MYB complexes controls oncogenic gene expression in acute myeloid leukemia [RNAseq_MV411]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Dysregulated gene expression is one of the most prevalent features in human cancers. Here, we show that most subtypes of acute myeloid leukemia (AML) depend on the aberrant assembly of the MYB transcriptional co-activator complex. By rapid and selective peptidomimetic interference with the binding of CBP/P300 to MYB, but not CREB or MLL1, we find that the leukemic functions of MYB are mediated by CBP/P300-mediated co-activation of a distinct set of transcriptional factor complexes that are aberrantly assembled with MYB in AML cells. This therapeutic remodeling is accompanied by dynamic redistribution of CBP/P300 complexes to genes that control cellular differentiation and growth. Thus, aberrantly organized transcription factor complexes control convergent gene expression programs in AML cells. These findings establish a compelling strategy for pharmacologic reprogramming of oncogenic gene expression that supports its targeting for leukemias and other human cancers caused by dysregulated gene control.
 
Overall design RNA-sequencing of a human leukemia cell line (MV411) treated with control PBS and peptidomimetic inhibitors over time
 
Contributor(s) Forbes L, Takao S, Koche RP, Pineda JM, Bradley RK, Kentsis A
Citation(s) 33527899
Submission date Dec 18, 2020
Last update date Feb 24, 2021
Contact name Richard Koche
E-mail(s) kocher@mskcc.org
Organization name Memorial Sloan Kettering Cancer Center
Street address 417 E. 68th St.
City New York
State/province New York
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (18)
GSM4979710 RNA_MV411_CREBMIM_1A
GSM4979711 RNA_MV411_CREBMIM_1B
GSM4979712 RNA_MV411_CREBMIM_1C
This SubSeries is part of SuperSeries:
GSE163470 Convergent organization of aberrant MYB complexes controls oncogenic gene expression in acute myeloid leukemia
Relations
BioProject PRJNA686277
SRA SRP298437

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE163466_Table_RNA_CRYBMIM_hg19_rawCounts.txt.gz 827.6 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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