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Series GSE163780 Query DataSets for GSE163780
Status Public on Dec 01, 2023
Title Long reads Nanopore-seq of pulled down RNA using probes against mbl-exon2
Organism Drosophila melanogaster
Experiment type Other
Summary To analyzed the different mbl issoforms we pulled down RNA using probes against mbl-exon2 and performed long read sequencing
Overall design 2 samples of Canton S flies head RNA were pulled down using probes against mbl-exon2. Nanopore PCR-cDNA Sequencing Kit sequencing was performed following manufacturer instructions.
Contributor(s) Kadener S
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Submission date Dec 23, 2020
Last update date Dec 01, 2023
Contact name Sebastian Kadener
Organization name Brandeis University
Department Biology department
Street address 415 South Street
City Waltham
State/province MA
ZIP/Postal code 02453
Country USA
Platforms (1)
GPL24622 MinION (Drosophila melanogaster)
Samples (2)
GSM4987140 BC01
GSM4987141 BC03
BioProject PRJNA687520
SRA SRP299115

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE163780_RAW.tar 23.8 Mb (http)(custom) TAR (of TDF)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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