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Series GSE164944 Query DataSets for GSE164944
Status Public on Jan 31, 2021
Title Localized EMT reprograms glial progenitors to promote spinal cord repair [single-cell RNA-seq]
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary Single nuclear RNA-sequencing was performed on spinal cord tissues from Tg(gfap:EGFP) zebrafish at 1 week post injury using the 10x Genomics platform.
 
Overall design Single nuclear RNA-sequencing of spinal cord tissue.
 
Contributor(s) Shaw DK, Saraswathy VM, Zhou L, Mokalled M
Citation(s) 33609461
Submission date Jan 15, 2021
Last update date Apr 20, 2021
Contact name Mayssa Mokalled
E-mail(s) mmokalled@wustl.edu
Phone 3142731835
Organization name Washington University
Department Developmental Biology
Street address 4523 Clayton Ave CB 8103
City St. Louis
State/province MO
ZIP/Postal code 631101501
Country USA
 
Platforms (1)
GPL23274 Illumina HiSeq 3000 (Danio rerio)
Samples (1)
GSM5023610 single-cell_injured_spinal_cord
This SubSeries is part of SuperSeries:
GSE164945 Localized EMT reprograms glial progenitors to promote spinal cord repair
Relations
BioProject PRJNA692494
SRA SRP301983

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE164944_RAW.tar 1.2 Gb (http)(custom) TAR (of RDS)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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