|
| Status |
Public on Jun 12, 2009 |
| Title |
Using pooled earthworm RNA to test 244K probes on TA-3 test array design 2520024 sense 2 |
| Organism |
Eisenia fetida |
| Experiment type |
Expression profiling by array
|
| Summary |
To validate the 244K 60-mer or 40-mer probes using a custom-designed Agilent oligo array and assuming sense orientation of all target sequences.
|
| |
|
| Overall design |
A total of four test arrays were designed assuming both sense and antisense orientations. A sole pooled RNA was used for testing all 4 designs. Two arrays were hybridized for each design. This series contains test results for design 2520024.
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| |
|
| Contributor(s) |
Gong P, Guan X |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jun 11, 2009 |
| Last update date |
Mar 21, 2012 |
| Contact name |
Ping Gong |
| E-mail(s) |
ping.gong@us.army.mil
|
| Phone |
(601) 634-3521
|
| Organization name |
US Army ERDC
|
| Department |
Environmental Laboratory
|
| Lab |
Environmental Genomics and Genetics
|
| Street address |
3909 Halls Ferry Road
|
| City |
Vicksburg |
| State/province |
MS |
| ZIP/Postal code |
39180 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL8681 |
Eisenia fetida 244K oligo test array version 3 |
|
| Samples (4)
|
| GSM415875 |
Test array design TA3_2520024_array 1_PMT gain 400 |
| GSM415876 |
Test array design TA3_2520024_array 1_PMT gain 500 |
| GSM415877 |
Test array design TA3_2520024_array 2_PMT gain 400 |
| GSM415878 |
Test array design TA3_2520024_array 2_PMT gain 500 |
|
| This SubSeries is part of SuperSeries: |
| GSE16551 |
Using pooled earthworm RNA to test 244K probes on TA-1, TA-2, TA-3, TA-4 test arrays |
|
| Relations |
| BioProject |
PRJNA122779 |
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