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Series GSE166446 Query DataSets for GSE166446
Status Public on Apr 27, 2021
Title Riboseq analysis of the rfl8 mutant-Functional characterization of the pentatricopeptide repeat protein PPR RFL8
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary blanc09_ripseq_rfl8-riboseq analysis of the rfl8 mutant-Which mitochondrial transcripts are bound by RFL8 protein? -Does the RFL8 loss impact on mitochondrial translation?
 
Overall design 4 samples with 2 biological replicates. genotype comparison
Web link http://tools.ips2.u-psud.fr/CATdb
 
Contributor(s) Mireau H
Citation(s) 33878189
Submission date Feb 09, 2021
Last update date Aug 03, 2021
Contact name VĂ©ronique BRUNAUD
E-mail(s) veronique.brunaud@inrae.fr
Organization name INRA - CNRS - UPSUD
Lab IPS2
Street address rue Noetzlin
City Gif-sur-Yvette
ZIP/Postal code 91190
Country France
 
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (4)
GSM5071284 col0 (1)
GSM5071285 col0 (2)
GSM5071286 rfl8_1
This SubSeries is part of SuperSeries:
GSE166459 Nuclear compensation to a lineage-specific mitochondrial genomic rearrangement in plants
Relations
BioProject PRJNA700978
SRA SRP305497

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE166446_RAW.tar 10.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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