|
| Status |
Public on Apr 27, 2021 |
| Title |
RNaseI-RIPseq for rfl8-Functional characterization of the pentatricopeptide repeat protein PPR RFL8 |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
blanc09_ripseq_rfl8-rnasei-ripseq for rfl8-Which mitochondrial transcripts are bound by RFL8 protein? -The RNaseI-RIPseq approach to find the in vivo binding sites of RFL8 protein on mitochondrial mRNAs via co-immunoprecipitation of 3HA tag fused in C-terminal of RFL8 protein
|
| |
|
| Overall design |
4 samples with 2 biological replicates. normal vs transgenic comparison
|
| Web link |
http://tools.ips2.u-psud.fr/CATdb
|
| |
|
| Contributor(s) |
Mireau H |
| Citation(s) |
33878189 |
| |
| Submission date |
Feb 09, 2021 |
| Last update date |
Aug 03, 2021 |
| Contact name |
Véronique BRUNAUD |
| E-mail(s) |
veronique.brunaud@inrae.fr
|
| Organization name |
INRAE - CNRS - UPSUD
|
| Lab |
IPS2
|
| Street address |
rue Noetzlin
|
| City |
Gif-sur-Yvette |
| ZIP/Postal code |
91190 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL19580 |
Illumina NextSeq 500 (Arabidopsis thaliana) |
|
| Samples (4)
|
|
| This SubSeries is part of SuperSeries: |
| GSE166459 |
Nuclear compensation to a lineage-specific mitochondrial genomic rearrangement in plants |
|
| Relations |
| BioProject |
PRJNA700979 |
| SRA |
SRP305503 |
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