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Series GSE168619 Query DataSets for GSE168619
Status Public on Dec 27, 2023
Title Whole genome mRNA expression profiling during Candida albicans growth in complete human serum
Organism Candida albicans
Experiment type Expression profiling by high throughput sequencing
Summary In order to get an insight into the complex interplay of mRNAs during the growth in complete human serum, the mRNA polulation of Candida albiacns NCCPF 400034 taken at 0, 20, 45, and 120 minutes was extracted and sequenced by Next Generation sequencing techniques.
 
Overall design Total RNA extraction from samples grown in YPD as control (02 samples) or complete human serum (06 samples: 02 replicates each time point ) and library preparared using Illumina kits. Sequenicng was performed using next generation sequencing platform.
 
Contributor(s) Anand R, Kashif M, Pandit A, Singh AP
Citation(s) 38139056
Submission date Mar 10, 2021
Last update date Dec 28, 2023
Contact name Agam Prasad Singh
E-mail(s) singhap@nii.ac.in
Organization name NII
Department IDL
Lab IDL
Street address Aruna Asaf Ali Marg
City New Delhi
State/province Delhi
ZIP/Postal code 110067
Country India
 
Platforms (2)
GPL15149 Illumina Genome Analyzer IIx (Candida albicans)
GPL15645 Illumina HiSeq 2000 (Candida albicans)
Samples (8)
GSM5151354 0_minutes_control_1
GSM5151356 0_minutes_control_2
GSM5151358 120_minutes_Serum_1
Relations
BioProject PRJNA713290
SRA SRP310090

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE168619_RAW.tar 2.1 Mb (http)(custom) TAR (of XLSX)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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