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Series GSE168992 Query DataSets for GSE168992
Status Public on Mar 17, 2022
Title Gene expression during conidia germination in Neurospora crassa on PDA
Organism Neurospora crassa
Experiment type Expression profiling by high throughput sequencing
Summary Conidia germination is critical for fungi to colonize various habitats. We sampled RNA expression at four stages of conidia germination, including fresh conidia (15min), polar growth (120min), doubling of long axis (240min), and first hyphal branching (360min) in Neurospora crassa. Cultures were made onPDA, iand two biological replicates were collected for all data points. The growth was under a labratory condition of 25C and constant light.
Overall design mRNA were sampled and compared from four time points across conida germination in Neurpsora crassa on different media
Contributor(s) Lopez-Giraldez F, Townsend JP, Wang Z
Citation(s) 35638725
Submission date Mar 16, 2021
Last update date Jun 16, 2022
Contact name Francesc Lopez
Organization name Yale University
Department Department of Genetics
Street address P.O. Box 27386
City West Haven
State/province CT
ZIP/Postal code 06516
Country USA
Platforms (1)
GPL26551 Illumina NovaSeq 6000 (Neurospora crassa)
Samples (12)
GSM5173697 N. crassa 15min [P1-1]
GSM5173698 N. crassa 15min [P1-2]
GSM5173699 N. crassa 15min [P1-3]
This SubSeries is part of SuperSeries:
GSE168995 Gene expression during conidia germination in Neurospora crassa
BioProject PRJNA714875
SRA SRP310858

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Supplementary file Size Download File type/resource
GSE168992_Ncrassa_PDA_LOX.txt.gz 520.0 Kb (ftp)(http) TXT
GSE168992_Ncrassa_PDA_gene_count_matrix.csv.gz 234.4 Kb (ftp)(http) CSV
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Processed data are available on Series record

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