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| Status |
Public on Apr 03, 2024 |
| Title |
A549 cell Next Gen sequencing (RNA-seq) for differential gene expression of untreated versus IL4 or IL4+ALOX15 siRNA treated cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Purpose: Identify genes regulated by ALOX15 in A549 cells that were treated with +/- IL4 and +/- ALOX15 siRNA by Next-gen sequencing
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| Overall design |
mRNA profiles of A549 cells that were treated with +/- IL4 and +/- ALOX15 siRNA for 48 hrs (in triplicate)
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| Contributor(s) |
Fong D, Phillips J |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Apr 08, 2021 |
| Last update date |
Apr 03, 2024 |
| Contact name |
Jonathan Phillips |
| Organization name |
Amgen
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| Street address |
1 Amgen center drive
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| City |
Thousand Oaks |
| State/province |
CA |
| ZIP/Postal code |
91320 |
| Country |
USA |
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| Platforms (1) |
| GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
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| Samples (15)
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| GSM5233378 |
A549, 10 ng/ml IL4_1 |
| GSM5233379 |
A549, 10 ng/ml IL4_2 |
| GSM5233380 |
A549, 10 ng/ml IL4_3 |
| GSM5233381 |
A549, 10 ng/ml IL4 + Compound A_1 |
| GSM5233382 |
A549, 10 ng/ml IL4 + Compound A_2 |
| GSM5233383 |
A549, 10 ng/ml IL4 + Compound A_3 |
| GSM5233384 |
A549, 10 ng/ml IL4 + Control Smartpool siRNA_1 |
| GSM5233385 |
A549, 10 ng/ml IL4 + Control Smartpool siRNA_2 |
| GSM5233386 |
A549, 10 ng/ml IL4 + Control Smartpool siRNA_3 |
| GSM5233387 |
A549, 10 ng/ml IL4 + ALOX15 Smartpool siRNA_1 |
| GSM5233388 |
A549, 10 ng/ml IL4 + ALOX15 Smartpool siRNA_2 |
| GSM5233389 |
A549, 10 ng/ml IL4 + ALOX15 Smartpool siRNA_3 |
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| Relations |
| BioProject |
PRJNA720719 |
| SRA |
SRP314126 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE171750_rsem_count.txt.gz |
541.4 Kb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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