NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE172373 Query DataSets for GSE172373
Status Public on Apr 20, 2021
Title Study of heavy metal stress in the basidiomycete Schizophyllum commune
Organism Schizophyllum commune
Experiment type Expression profiling by array
Summary Transcriptome changes associated with metal stress were investigated in order to identify tolerance mechanisms and the impact on inositol signaling. The wild type S. commune 12-43 was compared with 12-43 grown with addition of contaminated seepage water (HSW) and another wild type strain W22 grown with 0.01 mM Cd.
 
Overall design With microarray analysis, the mRNA expression pattern of heavy metal response was analyzed. The comparisons between the strain 12-43 and 12-43 grown on contaminated seepage water (HSW) and 12-43 with W22 grown with 0.01 mM Cd were observed. For each comparison two replicates were analyzed.
 
Contributor(s) Traxler L, Schlunk I, Erdmann S, Freihorst D, Krause K, Kothe E
Citation(s) 34200898
Submission date Apr 19, 2021
Last update date Jul 15, 2021
Contact name Erika Kothe
E-mail(s) erika.kothe@uni-jena.de
Organization name Friedrich-Schiller-University
Street address Neugasse 25
City Jena
ZIP/Postal code 07743
Country Germany
 
Platforms (1)
GPL11376 FSU-Schco1-Microarray v1.0
Samples (6)
GSM5253643 Monokaryon1_12-43_technical-replication_rep1
GSM5253644 Monokaryon1_12-43_technical-replication_rep2
GSM5253645 HSW_12-43-Haldensickerwasser(1:10)_biological-replicate_rep1
Relations
BioProject PRJNA723042

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172373_RAW.tar 490.0 Kb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap