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Series GSE172389 Query DataSets for GSE172389
Status Public on Apr 19, 2024
Title UV- and g-radiation induced molecular changes for rapid lipid accumulation in Chlorella sorokiniana
Organism Chlorella sorokiniana
Experiment type Expression profiling by high throughput sequencing
Summary The data in the present study suggested the possibility of using UV and γ-radiation to enhance lipid accumulation along with detailed insights at the molecular level.The transcriptomic data at 24 h post UV (1 J/cm2) and γ-radiation (1 kGy) revealed foremost effect of UV on photosynthetic machinery while in γ-, DNA damage, repair and replication at a global level. In addition, the key fatty acid biosynthesis related genes were also found to be upregulated which coincided with 1.56- and 1.73-fold increase in lipid content
Overall design Change in mRNA profile of Chlorella sorokiniana in response to UV and gamma with respect to control sample 24h post irradiation.
Contributor(s) Singh Reema DR, Srivastava AK
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Submission date Apr 20, 2021
Last update date Apr 19, 2024
Contact name Dr. Ashish Kumar Srivastava
Organization name Bhabha Atomic Research Centre
Street address Anushakti Nagar, Trombay
City Mumbai
State/province Maharashtra
ZIP/Postal code 400085
Country India
Platforms (1)
GPL30017 HiSeq X Ten (Chlorella sorokiniana)
Samples (6)
GSM5253940 Sample1: CA rep1
GSM5253941 Sample2: CB rep2
GSM5253942 Sample3: UA rep1
BioProject PRJNA723202
SRA SRP315508

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172389_TranscriptomeAssembly.fasta.gz 19.5 Mb (ftp)(http) FASTA
GSE172389_expression_counts.txt.gz 800.8 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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